mosaicperm.core.MosaicPermutationTest

class mosaicperm.core.MosaicPermutationTest

Generic class meant for subclassing.

Methods

compute_mosaic_residuals()	Computes mosaic-style residual estimates.
fit([nrand, verbose])	Runs the mosaic permutation test.
fit_tseries([nrand, verbose, n_timepoints, ...])	Runs mosaic permutation tests for various windows of the data, producing a time series of p-values.
permute_residuals([method])	Permutes residuals within tiles.
plot_tseries([time_index, alpha, show_plot])	Plots the results of fit_tseries().
summary([coordinate_index])	Produces an output summarizing the test.
summary_plot([show_plot])	Produces a plot summarizing the results of the test.